Three new lichen species from Macaronesia belonging in Ramalinaceae, with the description of a new genus
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Arafura 16, 5691JA, Son, The Netherlands
Evolution and Conservation Biology, InBios Research Center, Institut de Botanique B22, Université de Liège, Chemin de la vallée 4, 4000 Liège, Belgium
Publication date: 2020-06-02
Plant and Fungal Systematics 2020; 65(1): 167–175
Tylocliostomum is described as a new genus and T. viridifarinosum as a new species. Two Bacidina species, B. pallidocarpa and B. violacea, are also described as new to science. They all occur in Macaronesia (Azores, Madeira).
Aptroot, A., Rodrigues, F., Schumm, F., Câmara, S. & Gabriel, R. 2010. Lista dos líquenes e fungos liquenícolas (Fungi). In: Borges, P. A. V., Costa, A. C., Cunha, R., Gabriel, R., Gonçalves, V., Martins, A. F., Melo, I., Parente, P. M., Raposeiro, P., Rodrigues, P., Santos, R. S., Silva, L., Vieira, P. & Vieira, V. Listagem dos ­Organismos Terrestres e Marinhos dos Açores, pp. 27‒51. Princípia, Cascais.
Carvalho, P., Figueira, R. & Jones, M. P. 2008. Os líquenes e fungos liquenícolas (Fungi) dos arquipélagos da Madeira e das Selvagens. In: Borges, P. A. V., Abreu, C., Aguiar, A. M. F., Carvalho, P., Jardim, R., Melo, I., Oliveira, P., Sérgio, C., Serrano, A. R. M. & Vieira, P. Listagem dos Fungos, Flora e Fauna Terrestres dos Arquipélagos da Maderia e Selvagens, pp. 95–122. Secretaria Regional do Ambiente e dos Recursos Naturais do Governo Regional da Madeira, Madeira.
Cubero, O. F., Crespo, A. N. A., Fatehi, J. & Bridge, P. D. 1999. DNA extraction and PCR amplification method suitable for fresh, herbarium-stored, lichenized, and other fungi. Plant Systematics and Evolution 216: 243‒249.
Czarnota, P. & Guzow-Krzemińska, B. 2012. ITS rDNA data confirm a delimitation of Bacidina arnoldiana and B. sulphurella and support a description of a new species within the genus Bacidina. The Lichenologist 44: 743‒755.
Czarnota, P. & Guzow-Krzemińska, B. 2018. Bacidina mendax sp. nov., a new widespread species in Central Europe, together with a new combination within the genus Bacidina. The Lichenologist 50: 43‒57.
Gardes, M. & Bruns, T. D. 1993. ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113‒118.
Guzow-Krzemińska, B., Sérusiaux, E., van den Boom, P. P. G., Brand, A. M., Launis, A., Łubek, A. & Kukwa, M. 2019. Understanding the evolution of phenotypical characters in the Micarea prasina group (Pilocarpaceae) and descriptions of six new species within the group. MycoKeys 57: 1‒30.
Hawksworth, D. L., Earland-Bennett, P. M. & Coppins, B. J. 2006. Lichenophoma haematommatis, a previously overlooked European sorediate species of Cliostomum (Lecanorales, Ramalinaceae). Herzogia 19: 5‒10.
Hofstetter, V., Miadlikowska, J., Kauff, F. & Lutzoni, F. 2007. Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota). Molecular Phylogenetics and Evolution 44: 412‒426.
Huelsenbeck, J. P. & Ronquist, F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754‒755.
Katoh, K. & Standley, D. M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772–780.
Kistenich, S., Timdal, E., Bendiksby, M. & Ekman, S. 2018. Molecular systematics and character evolution in the lichen family Ramalinaceae (Ascomycota: Lecanorales). Taxon 67: 871‒904.
Lanfear, R., Frandsen, P. B., Wright, A. M., Senfeld, T. & Calcott, B. 2016. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution 34: 772‒773.
Maddison, W. & Maddison, D. 2016. Mesquite. A modular system for evolutionary analysis. Version 3.11. www.mesquiteproject.org.
Magain, N. 2018. PLexus, a PERL package to handle DNA matrices. Available from the author. https://github.com/NicolasMaga....
Mark, K., Cornejo, C., Keller, C., Flück, D. & Scheidegger, C. 2016. Barcoding lichen-forming fungi using 454 pyrosequencing is challenged by artifactual and biological sequence variation. Genome 59: 685‒704.
Meyer, B. & Printzen, C. 2000. Proposal for a standardized nomenclature and characterization of insoluble lichen pigments. The Lichenologist 32: 571‒583.
Miller, M. A., Pfeiffer, W. & Schwartz, T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In 2010 gateway computing environments workshop (GCE): 1‒8.
Orange, A., James, P. W. & White, F. J. 2001. Microchemical methods for the identification of lichens. British Lichen Society. British Lichen Society.
Pitard, J. & Harmand, J. 1911. Contribution à l’étude des lichens des îles Canaries. Mémoires de la Société botanique de France 2: 1‒69.
Rambaut, A. & Drummond, A. J. 2007. Tracer v1. 5.0. Available online at: http://tree.bio.ed.ac.uk/softw....
Smith, C. W., Aptroot, A., Coppins, B. J., Fletcher, A., Gilbert, O. L., James, P. W. & Wolseley, P. A. (eds) 2009. The Lichens of Great Britain and Ireland. The British Lichen Society, Department of Botany, The Natural History Museum, London.
Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688‒2690.
Stamatakis, A., Hoover, P. & Rougemont, J. 2008. A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57: 758‒771.
Stiller, J. W. & Hall, B. D. 1997. The origin of red algae: implications for plastid evolution. Proceeding of the National Academy of Science of the United States of America 94: 4520–4525.
Van den Boom, P. P. G. 2015a. Further new or interesting lichens and lichenicolous fungi from Madeira with notes on the genus Gyalidea in Macaronesia. Folia Cryptogamica Estonica 52: 73‒79.
Van den Boom, P. P. G. 2015b. Notes on the genus Anisomeridium (lichenized Ascomycotina) from Madeira and the Azores (Macaronesia). Phytotaxa 205: 65‒70.
Van den Boom, P. P. G. 2016. Lichens and lichenicolous fungi of the Azores (Portugal), collected on São Miguel and Terceira with the descriptions of seven new species. Acta Botanica Hungarica 58: 199‒222.
Van den Boom, P. & Ertz, D. 2014. A new species of Micarea (Pilocarpaceae) from Madeira growing on Usnea. The Lichenologist 46: 295–301.
Van den Boom, P. P. G. & Alvarado, P. 2019. Lichens and lichenicolous fungi of Faial, (Azores, Portugal), with the descriptions of three new species. Herzogia 32: 421‒437.
Wheeler, D. L., Barrett, T., Benson, D. A., Bryant, S. H., Canese, K., Chetvernin, V., Church, D. M., DiCuccio, M., Edgar, R., Federhen, S., Geer, L. Y., Kapustin, Y., Khovayko, O., Landsman, D., Lipman, D. J., Madden, T. L., Maglott, D. R., Ostell, J., Miller, V., Pruitt, K. D., Schuler, G. D., Sequeira, E., Sherry, S. T., Sirotkin, K., Souvorov, A., Starchenko, G., Tatusov, R. L., Tatusova, T. A., Wagner, L. & Yaschenko, E. 2007. Database resources of the national center for biotechnology information. Nucleic Acids Research 35: D5–D12.
White, T. J., Bruns, T., Lee, S. & Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications 18: 315–322.
Zoller, S., Scheidegger, C. & Sperisen, C. 1999. PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichenforming ascomycetes. The Lichenologist 31: 511–516.
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