Coniochaeta endophytica sp. nov., a foliar endophyte
associated with healthy photosynthetic tissue of Platycladus
orientalis (Cupressaceae)
1
Department of Ecology and Evolutionary Biology, The University of
Arizona, Tucson, AZ 85721, USA
2
School of Sciences, Universidad Nacional Autónoma de México,
Mexico City, 04510, Mexico
3
Department of Biosystems Engineering, The University of Arizona,
Tucson, AZ 85721, USA
4
School of Plant Sciences, The University of Arizona, Tucson, AZ
85721, USA
5
Indigo Agriculture, 500 Rutherford Avenue, Boston, MA 02129, USA
6
National Museum of Natural Science, 1 Guancian Road, Taichung,
Taiwan, Republic of China
Publication date: 2019-07-18
Plant and Fungal Systematics 2019; 64(1): 65-79
KEYWORDS
ABSTRACT
The ecologically diverse genus Coniochaeta (Coniochaetaceae, Ascomycota) contains numerous endophytic strains that occur in healthy leaves and lichen thalli in temperate and boreal North America. These endophytes frequently represent undescribed species. Here we examine two endophytic isolates of Coniochaeta from healthy photosynthetic tissue of Platycladus orientalis (Cupressaceae), a conifer cultivated for horticultural use in Arizona, USA. On the basis of morphology, in vitro assays, phylogenetic analyses of two loci, and analyses of whole genome data, we designate these endophytes as a novel species, Coniochaeta endophytica sp. nov. Strains of C. endophytica are closely related
to an isolate from a native lichen in North Carolina, which we also characterize here. We compare C. endophytica with two known species that appear to be close relatives: C. prunicola, associated with wood necrosis in stonefruit trees in South Africa, and C. cephalothecoides,
isolated from soil in Asia. The new species is distinct in phylogenetic, in vitro, and whole-genome analyses from C. prunicola, and differs slightly in conidiophore morphology from that species. Although available sequence data for C. cephalothecoides are of uncertain relation to the type specimen for that species, our results support the distinctiveness of C. endophytica on the basis of morphology, perithecial formation, and
phylogenetic analyses. We discuss the challenge of identifying new species in the context of fungal ecology surveys, such as those for endophytes, which often rely only on a single locus and can misidentify taxa based on their closest matches in public databases or simple
comparisons of barcode sequences alone.
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16.
Fungal diversity notes 1611–1716: taxonomic and phylogenetic contributions on fungal genera and species emphasis in south China
Indunil C. Senanayake, Walter Rossi, Marco Leonardi, Alex Weir, Mark McHugh, Kunhiraman C. Rajeshkumar, Rajnish K. Verma, Samantha C. Karunarathna, Saowaluck Tibpromma, Nikhil Ashtekar, Sreejith K. Ashtamoorthy, Sanjay Raveendran, Gurmeet Kour, Aishwarya Singh, Saúl De la Peña-Lastra, Antonio Mateos, Miroslav Kolařík, Vladimír Antonín, Hana Ševčíková, Fernando Esteve-Raventós, Ellen Larsson, Fermín Pancorbo, Gabriel Moreno, Alberto Altés, Yolanda Turégano, Tian-Ye Du, Li Lu, Qi-Rui Li, Ji-Chuan Kang, Sugantha Gunaseelan, Kezhocuyi Kezo, Malarvizhi Kaliyaperumal, Jizhen Fu, Milan C. Samarakoon, Yusufjon Gafforov, Shakhnoza Teshaboeva, Pradeep C. Kunjan, Arya Chamaparambath, Adam Flakus, Javier Etayo, Pamela Rodriguez-Flakus, Mikhail P. Zhurbenko, Nimali I. de Silva, Danushka S. Tennakoon, K. P. Deepna Latha, Patinjareveettil Manimohan, K. N. Anil Raj, Mark S. Calabon, Abdollah Ahmadpour, Zeinab Heidarian, Zahra Alavi, Fatemeh Alavi, Youbert Ghosta, Razmig Azizi, Mei Luo, Min-Ping Zhao, Nuwan D. Kularathnage, Li Hua, Yun-Hui Yang, Chun-Fang Liao, Hai-Jun Zhao, Anis S. Lestari, Subashini C. Jayasiri, Feng-Ming Yu, Lei Lei, Jian-Wei Liu, Omid Karimi, Song-Ming Tang, Ya-Ru Sun, Yong Wang, Ming Zeng, Zin H. Htet, Benedetto T. Linaldeddu, Artur Alves, Alan J. L. Phillips, Carlo Bregant, Lucio Montecchio, André De Kesel, Vincent P. Hustad, Andrew N. Miller, Anna G. Fedosova, Viktor Kučera, Mubashar Raza, Muzammil Hussain, Yan-Peng Chen, Vinodhini Thiyagaraja, Deecksha Gomdola, Achala R. Rathnayaka, Asha J. Dissanayake, Nakarin Suwannarach, Sinang Hongsanan, Sajeewa S. N. Maharachchikumbura, Lakmali S. Dissanayake, Nalin N. Wijayawardene, Rungtiwa Phookamsak, Saisamorn Lumyong, E. B. Gareth Jones, Neelamanie Yapa, Dhanushka N. Wanasinghe, Ning Xie, Mingkwan Doilom, Ishara S. Manawasinghe, Jian-Kui Liu, Qi Zhao, Biao Xu, Kevin D. Hyde, Jiage Song
Fungal Diversity
Indunil C. Senanayake, Walter Rossi, Marco Leonardi, Alex Weir, Mark McHugh, Kunhiraman C. Rajeshkumar, Rajnish K. Verma, Samantha C. Karunarathna, Saowaluck Tibpromma, Nikhil Ashtekar, Sreejith K. Ashtamoorthy, Sanjay Raveendran, Gurmeet Kour, Aishwarya Singh, Saúl De la Peña-Lastra, Antonio Mateos, Miroslav Kolařík, Vladimír Antonín, Hana Ševčíková, Fernando Esteve-Raventós, Ellen Larsson, Fermín Pancorbo, Gabriel Moreno, Alberto Altés, Yolanda Turégano, Tian-Ye Du, Li Lu, Qi-Rui Li, Ji-Chuan Kang, Sugantha Gunaseelan, Kezhocuyi Kezo, Malarvizhi Kaliyaperumal, Jizhen Fu, Milan C. Samarakoon, Yusufjon Gafforov, Shakhnoza Teshaboeva, Pradeep C. Kunjan, Arya Chamaparambath, Adam Flakus, Javier Etayo, Pamela Rodriguez-Flakus, Mikhail P. Zhurbenko, Nimali I. de Silva, Danushka S. Tennakoon, K. P. Deepna Latha, Patinjareveettil Manimohan, K. N. Anil Raj, Mark S. Calabon, Abdollah Ahmadpour, Zeinab Heidarian, Zahra Alavi, Fatemeh Alavi, Youbert Ghosta, Razmig Azizi, Mei Luo, Min-Ping Zhao, Nuwan D. Kularathnage, Li Hua, Yun-Hui Yang, Chun-Fang Liao, Hai-Jun Zhao, Anis S. Lestari, Subashini C. Jayasiri, Feng-Ming Yu, Lei Lei, Jian-Wei Liu, Omid Karimi, Song-Ming Tang, Ya-Ru Sun, Yong Wang, Ming Zeng, Zin H. Htet, Benedetto T. Linaldeddu, Artur Alves, Alan J. L. Phillips, Carlo Bregant, Lucio Montecchio, André De Kesel, Vincent P. Hustad, Andrew N. Miller, Anna G. Fedosova, Viktor Kučera, Mubashar Raza, Muzammil Hussain, Yan-Peng Chen, Vinodhini Thiyagaraja, Deecksha Gomdola, Achala R. Rathnayaka, Asha J. Dissanayake, Nakarin Suwannarach, Sinang Hongsanan, Sajeewa S. N. Maharachchikumbura, Lakmali S. Dissanayake, Nalin N. Wijayawardene, Rungtiwa Phookamsak, Saisamorn Lumyong, E. B. Gareth Jones, Neelamanie Yapa, Dhanushka N. Wanasinghe, Ning Xie, Mingkwan Doilom, Ishara S. Manawasinghe, Jian-Kui Liu, Qi Zhao, Biao Xu, Kevin D. Hyde, Jiage Song
Fungal Diversity
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| eISSN: | 2657-5000 |
| ISSN: | 2544-7459 |
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